Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917959.1_cds_XP_016467505.1_60246
CDS Infomation

[gene=LOC107790113] [db_xref=GeneID:107790113] [protein=IAA-amino acid hydrolase ILR1-like 3] [protein_id=XP_016467505.1] [location=complement(join(3821..4195,4472..4600,4713..5027,5116..5241,7066..7437))] [gbkey=CDS]
Sequence

ATGGGTTCGTTTTGCGTAGACTTGATACTCATATTGACATTACTATCGACGAGCTTTCCG
TACAATTCATGGGCTGCAGATACAGAAACTGATTTGGGATCTGAAACGGGGTCACTAACT
CGGGAGCTTCTGGAATCGGCGAGGCAACCGGAGTTCTTGGATTGGTTGAGAAGGGTGAGA
AGGAGAATCCATGAGTACCCAGAATTGTCATTTCAAGAGCACCAAACCAGTCAACTCGTC
CGAAATGAGCTGGACTCGCTTGGCGTCAAGTTCATGTGGCCTGTGGCTAAAACCGGTGTG
GTGGGAACCATAGGGTCAGGTGCTCAACCTTGGTTTGGTCTGAGAGCTGACATGGATGCT
CTCCCCCTTCAGGAGTTGGTAGATTGGGAGTACAAAAGCAAGATTGATGGCAAAATGCAT
GCCTGTGGCCATGATGCTCATGTCACCATGCTGCTTGGAGCAGCTAGATTGATTCAGAAC
AGAAGGGACAAGTTGAAGGGCACAGTTAAGCTTGTCTTCCAACCTGCAGAAGAAGGATAT
GCTGGTGCCTCCTATATGTTAGAAGAAGGCGCATTAGATGGGTTTAAAGGAATATTTGGC
TTGCATGTCTGGCCATTTATGCCCGTAGGCACTATTGGTTCGAGACCTGGTCCTATTATG
GCTGGATCAAGCAGGTTTACTGCAGTAGTGCAAGGGAAAGGCGGCCATGCAGCAACACCA
CATAAAACTAAGGATCCAATGTTGGCTGCTTCTATGGCAGTTCTTGCACTCCAACAACTT
ATTTCTCGAGAAACTGATCCTCTAGAGCCTAGGGTTGTCTCTGTTACATTTGTAGATGGT
GGTCAAGCTGGAAATGTAATCCCTGCAAGTGTAAGGTTTGGTGGAACCTTCCGGTTCATG
ACATTAGAAGGATATTCCTATCTTAAGCAGAGGATCAAAGAGATCATTGAGACTCAGGCA
GGAGTACATCAATGCTCTGCCACCATTGATTTCATGGAGGAAATGAGGCCATATCTTCCA
ACTATAAATGATCCTACTATCTATGATCATGGTAAAAGAGTTGGAGAAATCTTGCTTGGC
GAGAATAACGTGCAGCATTCCCCGGCTTTAATGGCTGCAGAGGACTTTGGGTTCTATTCC
CAGAAGATGGCAACTGCATTTTTCTTCATTGGGACACAAAATAAAACAGACGTGTCTGCT
ATTAAAGGTTTGCACTCCCCATACTTCACCATTGATGAAGAAGTTCTTCCAATAGGAGCA
GCCCTCCATGCTGCTGTTGCCATATCTTACTTGGATACACATTCTGAGTCAGAGTGA

Peptide Sequence

PEP ID

XP_016467505.1
PEP Infomation

PREDICTED: IAA-amino acid hydrolase ILR1-like 3 [Nicotiana tabacum]
Sequence

MGSFCVDLILILTLLSTSFPYNSWAADTETDLGSETGSLTRELLESARQPEFLDWLRRVR
RRIHEYPELSFQEHQTSQLVRNELDSLGVKFMWPVAKTGVVGTIGSGAQPWFGLRADMDA
LPLQELVDWEYKSKIDGKMHACGHDAHVTMLLGAARLIQNRRDKLKGTVKLVFQPAEEGY
AGASYMLEEGALDGFKGIFGLHVWPFMPVGTIGSRPGPIMAGSSRFTAVVQGKGGHAATP
HKTKDPMLAASMAVLALQQLISRETDPLEPRVVSVTFVDGGQAGNVIPASVRFGGTFRFM
TLEGYSYLKQRIKEIIETQAGVHQCSATIDFMEEMRPYLPTINDPTIYDHGKRVGEILLG
ENNVQHSPALMAAEDFGFYSQKMATAFFFIGTQNKTDVSAIKGLHSPYFTIDEEVLPIGA
ALHAAVAISYLDTHSESE

Transcript Sequence

Gene sequence data has not been registered.